MTS Program Overview

The Master of Theological Studies – Franciscan Theology (MTS) is a two-year program at the Franciscan School of Theology in San Diego, designed for both professional and spiritual growth. Rooted in the joy-filled Franciscan Catholic tradition, it equips you with practical skills and hands-on learning to integrate faith into your career and vocation. Our faculty foster a spirit of service, solidarity, and compassion, preparing students to bring positive change to communities locally and globally.

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Who Is the MTS Degree For?

Designed for established professionals and recent undergraduates alike, this program is ideal for those pursuing careers in religious education, parish support, or ministry, or as preparation for further academic work. The MTS degree program can accommodate all experience levels and welcomes anyone seeking a deeper understanding of faith-based service.

  • Educators and Teachers
  • In Parish, Church, Campus/College Ministry
  • Business Professionals
  • Counselors/Medical Professionals
  • Aspiring Theologians
  • Military Professionals
  • Community Leaders
  • Seekers
  • Career Changers
  • Individuals looking for something more
  • Those looking to integrate their faith into their respective careers

MTS Program Requirements

MTS students are required to:

  • Complete 48 semester units as described in the academic catalog, a maximum of 13 of which may be taken at the University of San Diego’s graduate schools.
  • Maintain an overall 3.0 grade point average in all required and elective courses.
  • Be enrolled in the school full-time for at least four semesters to fulfill the 2-year full-time tuition residency requirement.
  • Complete all work within four years of the first semester of enrollment.

Discover the Franciscan Difference

The Franciscan School of Theology embodies Franciscan theology in a diverse world, offering an optimistic, Christ-centered perspective. We integrate pastoral and academic learning, nurturing both mind and heart, and, in partnership with the University of San Diego, share a commitment to Catholic identity, academic excellence, social change, and global awareness. On-campus students benefit from small class sizes, experienced faculty, a supportive community, career-focused education, and access to USD resources.

MTS Curriculum

The MTS curriculum provides a breadth of theological understanding with a foundation in Roman Catholic theology through the lens of St. Francis of Assisi. Students take courses in Scripture, spirituality, historical studies, religion and society, liturgy, and systematic theology.

Featured Courses

Introduction to Old Testament

After a brief introduction to the Bible as a whole and various approaches to it, this course seeks to present an overview of the Old Testament by studying its main literary works, theological traditions, and the historical contexts in which they grew. The primary focus is on theology and spirituality.

Introduction to New Testament

Introduction to the New Testament studies the writings of the New Testament with special focus on the Four Gospels, the Acts of the Apostles, and the Pauline Letters. The course also covers the history and methods for interpreting the New Testament, especially in light of the Second Vatican Council’s Dogmatic Constitution on Divine Revelation, Dei Verbum (1965).

Introduction to Liturgy

An introductory course on fundamental elements of Catholic Liturgy, including historical development of celebration of the Eucharistic liturgy, organization of liturgical space, important Church norms on liturgical practice and theology.

Theology Church and World: Introduction

An introductory course in theology which will discuss sources, methodology, relationship to the world, and an understanding of the Catholic Magisterium. This course will consist of lectures, small group discussion, written midterms and finals as well as a short oral class presentation. Required course for first year students.

Fundamental Moral Theology

Moral theology helps us to live faithful lives as disciples of Jesus Christ. Our human dignity emerges from being created in the image of God, but our sin impedes our response to God’s love. This course will present core sources (Scripture, tradition, natural law, and human experience), methods, and concerns of moral theology. Students will learn about models of moral decision making, virtue, conscience, and synodal
discernment.

Intercultural Theology

This course will examine the historical interaction between Christianity and various cultures throughout its global mission of evangelization. It will explore a diverse approach to accommodating local cultures and study various contextual theologies and religious practices that have emerged in response to the specific concerns of local communities as they embrace and nurture Christianity in new contexts.

History of Christianity I

History of Christianity I covers the development of early and ancient Christianity, and medieval Christianity, Gregory the Great to the eve of the Reformation.

History of Christianity II

This course covers the development of Christianity from Reformation times to the 20th century. Taught in modules, the first part covers the Reformation to Vatican I and the second part covers the history of Catholicism in the U.S.

Ecclesiology

This course will introduce students to the mystery of the Church as a historically developing reality in which the People of God faithfully strive to understand and express what their life “in Christ” means both for them and for the world. Students will be challenged to see themselves as integral participants in the further development of this mystery, and to develop the critical eye necessary to seeing their present and future ministry in this light.

Course Name (OT 501)

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Course Name (OT 501)

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Course Name (OT 501)

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Program Faculty

Students of the MTS program study with renowned scholars whose teachings are drawn from lives of active service in parishes, schools, and community involvement. With a small student-teacher ratio, every student gets access to a wealth of knowledge and lived experiences.

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Juliet Mousseau, RSCJ, PhD
Vice President for Academic Affairs; Professor of Historical Theology
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Juliet Mousseau, RSCJ, PhD
Vice President for Academic Affairs; Professor of Historical Theology

Biography

Name:Juliet Mousseau, RSCJ, PhD
Specialization:Medieval Theology, Parisian School of St Victor
Email: jmousseau@fst.edu
Phone:619.574.5802

“One of the most important gifts we bring to our ministry is the truth of our faith and history. Historical studies help us know how blessed the Church is and how we have overcome challenging times throughout history.”

Juliet Mousseau, RSCJ, completed her doctorate in historical theology at Saint Louis University in 2006. After teaching at Saint Louis University and the University of Dallas School of Ministry, she entered the Society of the Sacred Heart in 2009. She served as a professor of church history at the Aquinas Institute of Theology from 2012 to 2021. During that time, she published on the twelfth-century Abbey of Saint Victor as well as contemporary issues in religious life. She made her final profession as a Religious of the Sacred Heart in January 2020. She became the Vice President for Academic Affairs in 2021.

Degrees

  • Ph.D. Saint Louis University 2006
  • M.A. Saint Louis University 2002
  • S.T.L. Jesuit School of Theology, Santa Clara University 2024
  • B.A. Gonzaga University 2000

Select Publications

St. Madeleine Sophie Barat: Leadership in a Divided World (New York: Paulist, 2025).

Reseeding Religious Life through Global Sisterhood, edited by Susan Rose Francois, CSJP, and Juliet Mousseau, RSCJ (Collegeville, MN: Liturgical, 2024).

Prophetic Witnesses to Joy: A Theology of the Vowed Life (Collegeville, MN: Liturgical Press, 2021).

Life at Saint Victor, edited by Frans van Liere and Juliet Mousseau, Victorine Texts in Translation 9 (Turnhout: Brepols, 2021).

In Our Own Words: Religious Life in a Changing World, edited by Juliet Mousseau and Sarah Kohles (Collegeville, MN: Liturgical Press, 2018).

A Companion to the Abbey of Saint Victor in Paris, edited by Hugh Feiss and Juliet Mousseau, Brill’s Companions to the Christian Tradition (Leiden: Brill, 2017).

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Joseph Chinnici, OFM
President Emeritus -Professor of History
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Joseph Chinnici, OFM
President Emeritus -Professor of History

Biography

Name:Joseph Chinnici, OFM
Specialization:20th Century American Catholicism, Franciscan Theology
Email: jchinnici@fst.edu
Phone:619-574-5814

“For me, history, theology, and ministry are inseparable. Whether in the classroom, the pulpit, the office or in the community our work can be an act of worship.”

An Oxford-educated historian, Joe is a widely respected scholar, teacher, and speaker in the history of American Catholicism and the development of Franciscan theology and spirituality. Past president of the American Catholic Historical Association (2007-2008), he authored the seminal work Living Stones: The History and Structure of Catholic Spiritual Life in the United States (1989, 1996). When Values Collide: The Catholic Church, Sexual Abuse, and the Challenges of Leadership (2010) won first prize in pastoral theology from several national organizations. His latest book is entitled American Catholicism Transformed from the Cold War to the Council  (Oxford, 2021). He has been general editor of the Franciscan Heritage Series, which makes available to contemporary audiences the spiritual, theological, and social inheritance of St. Francis of Assisi. Apart from his teaching duties, Joe has served in various administrative posts throughout his career: nine years as Provincial Minister for the Franciscan Friars of the Saint Barbara Province (1988-1997), two stints as Academic Dean at the Franciscan School of Theology, Chairman of the Commission for the Retrieval of the Franciscan Intellectual Tradition (CFIT, 2000-2013), and President of the Franciscan School of Theology (2011-2016).

Degrees

  • D.Phil. Oxford University 1976
  • MA Graduate Theological Union 1971
  • MDiv Franciscan School of Theology 1972
  • BA San Luis Rey College 1968

For a complete list of publications. See Curriculum Vitae.

Courses

Themes in Contemporary Catholicism

Using some secondary studies in the history of the Catholic community in the United States, research materials, primary documents, and a seminar method, this course examines selected themes in contemporary Catholicism, 1945-1989: religion and society during the Cold War, the interpretation of the 1960s, challenges of race and ethnicity, family life, women in ministry, pastoral practice, and other issues.

American Catholic Spirituality

Through the use of original documents and case studies, this course examines selected themes in the history of Catholic religious practice in the United States: models of holiness, liturgy, rites of passage, the relationship between prayer and Institutionalization, popular devotions, etc. Special attention is paid to the relationships between faith, religious practice, spiritual experience, and culture.

Interpreting the Church Today

An intellectual and pastoral resource for ministry, this course uses both a historical method and theological analysis to examine key issues in Church renewal from the time of the Second Vatican Council to the present. Its primary goal is to develop an overall understanding of how the Church changes and develops in history and society and how understanding this might help shape the pastoral minister’s reflections, practice, and spirituality. Running throughout the will be an occasional reflection on Pope Francis’ Apostolic Exhortations and Encyclicals.

History, Theology, Spirituality in the Franciscan Tradition

A basic introduction to the early theological development of the Franciscan Intellectual Tradition, this course examines key thinkers, themes, and texts from 1209-1322: Francis and Clare of Assisi, Robert Grosseteste, Alexander of Hales, Bonaventure, Peter John Olivi, John Duns Scotus, and William of Ockham. Attention will be paid to their social context and meaning.

An exploration of predominant themes in Franciscan spiritual writing with special attention to Bonaventure, Angela of Foligno, Franciscan mystics and contemplatives, and the Eremetical tradition 13th to 17th centuries.

Francis of Assisi: Early Documents

Presents the principal events in the life of Francis of Assisi and discusses the historical context of early Franciscan documents written between 1228 and 1280. The student will be able to offer a critical reading of early Franciscan documents according to the particular emphases of each text.

Writings of Francis and Clare of Assisi

A careful reading of the complete writings of the two saints of Assisi, exploring their “Gospel form of life,” the bases of Francis-Clarian spirituality; their images of God, Christ, Church, and the human person. All texts are available in English translation.

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Shannon McAlister, PhD
Associate Professor of Theology & Spirituality; Director of Field Education
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Shannon McAlister, PhD
Associate Professor of Theology & Spirituality; Director of Field Education

Biography

Name:Shannon M. McAlister, PhD
Specialization:Theology of God; Spirituality; Moral Theology and Ethics
Email: smcalister@fst.edu
Phone:619.574.5717

Shannon McAlister is Associate Professor of Theology and Spirituality, and Director of Field Education. She holds a Ph.D. in Theology from The Catholic University of America, and is also a trained and practicing spiritual director. She taught at Fordham University in New York City for 13 years before joining the Franciscan School of Theology at the University of San Diego, and she currently serves as the President of the Society for the Study of Christian Spirituality.

Dr. McAlister’s research focuses on feminine-gendered language for God—and the portrayal of God as a woman and mother—within the works of the Fathers, saints, and Doctors of the Church in the Latin West. Her work with Latin texts overturns a widely held, scholarly narrative which mistakenly portrays feminine language for God as disappearing after the days of the early Church.

Her publications have shown that God was widely portrayed as a woman and mother all the way through the height of the Middle Ages—a tradition which was carried forward even into the nineteenth century in those places where the works of Augustine of Hippo, Gregory the Great, and Thomas Aquinas were read. Her 2018 article on “Christ as the Woman Seeking Her Lost Coin: Luke 15:8-10 and Divine Sophia in the Latin West” was the most-read article in Theological Studies two-and-a-half years after it was published; and her book on the history of a discussion in the Middle Ages about calling God the Father a “Mother” and God the Son a “Daughter” is under contract with Notre Dame Press.

Degrees

  • Ph.D., Systematic Theology, School of Theology and Religious Studies, The Catholic University of America, May 12, 2012
  • M.A., Historical and Systematic Theology, The Catholic University of America,  January 31, 2008
  • Certificate, Spiritual Direction Institute: Art and Practice of Spiritual Direction, Mercy Center, Burlingame, California, November 9, 2019

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Angela Zautcke, PhD
Assistant Professor of Sacred Scripture
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Angela Zautcke, PhD
Assistant Professor of Sacred Scripture

Biography

Name:Angela Zautcke, PhD
Specialization:Sacred Scripture
Email: angelazautcke@fst.edu
Phone:619-574-5815

Angela Zautcke, PhD, a San Diego native and Assistant Professor of Sacred Scripture at the Franciscan School of Theology. She received her doctorate in Theology from the University of Notre Dame, where she studied Christianity and Judaism in Antiquity. While at Notre Dame, Dr. Zautcke received the Notebaert Fellowship, the university’s premiere fellowship for doctoral students. She was also awarded the Catholic Biblical Association’s Emerging Scholars Fellowship in 2023. Dr. Zautcke’s research focuses on the study of the New Testament within the context of Judaism and the Greco-Roman world. Dr. Zautcke also earned a Master of Theological Studies (MTS) degree from the Franciscan School of Theology.

Degrees

  • Ph.D. in Theology – University of Notre Dame
  • MTS – University of Notre Dame
  • MTS – Franciscan School of Theology
  • MA in Marriage and Family Therapy – University of San Diego
  • BA in English Literature – University of Southern California

Courses

Introduction to Old Testament

After a brief introduction to the Bible as a whole and various approaches to it, this course seeks to present an overview of the Old Testament by studying its main literary works, theological traditions, and the historical contexts in which they grew. The primary focus is on theology and spirituality.

Old Testament Wisdom Literature

This course is a survey of the wisdom material of the Bible, focusing on the Old Testament. We will explore themes of Wisdom theology in the wisdom books and in other types of literature in the OT. With these themes in mind, the course also discusses how Wisdom theology appears in some works in the New Testament.

Luke-Acts

This course is a study of the Gospel of Luke and Acts of the Apostles. The course explores these documents from a literary and historical perspective. To this end, the course examines the historical, cultural, and geographical setting of the gospel and Acts as well as its authorship, audience, literary techniques and characteristics, theology and important themes. The course also compares the purpose, themes and orientation of Luke’s Gospel with the other synoptic gospels and compare Acts with other contemporaneous Greco-Roman literature.

Letters of St. Paul

This class introduces students to the Pauline epistles. Students will study the letters within the context of the Greco-Roman world and first-century Judaism to gain a better understanding of their theological message both for their original audience and today.

Psalms

This class introduces students to the language and literary form of the psalms. Students study the psalms in light of Old Testament theology, the canon of Scripture, communal worship and prayer.

Publications

  • Book review of Literary Theory and the New Testament, by Mical Beth Dinkler, Ancient Jew Review, 6 December 2022.
  • Co-Editor with Mark Elliott and Raleigh C. Heth, Studies in the History of Exegesis (Tubingen: Mohr Siebeck, 2022).
  • “Erasing the Gospels: Sinaiticus Syriacus and Patterns among Syriac Gospel Palimpsests,”Early Christianity 12 (2021): 85-102.
  • Contributing author to Christopher Baron, ed. The Herodotus Encyclopedia, (Hoboken: Wiley, 2021).

Academic Awards

  • Notebaert Fellowship – University of Notre Dame
  • Dean’s Fellowship – University of Notre Dame
  • Mary Stuart Rogers Scholarship – Franciscan School of Theology
  • Dean’s Scholarship – University of Southern California
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Christopher M. O’Brien, PhD
Assistant Professor of Sacramental and Liturgical Theology
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Christopher M. O’Brien, PhD
Assistant Professor of Sacramental and Liturgical Theology

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Biography

Name:Christopher M. O’Brien, PhD
Specialization:Sacramental and Liturgical Theology
Email:  cobrien1@fst.edu
Phone:619-574-5713

Christopher M. O’Brien, PhD, is Assistant Professor of Sacramental and Liturgical Theology at the Franciscan School of Theology. He received his doctorate from The Catholic University of America in 2025 in Liturgical Studies/ Sacramental Theology. Prior to his time at CUA, he received a B.S. in Physics and an M.A. in Education from Stanford University, and an M. Div. from the University of Notre Dame. He also spent five years teaching physics and mathematics, mostly at Catholic high schools. His research, writing, and teaching aims to put liturgical-sacramental history and theology into conversation with lived experience of Christian worship. His articles on topics such as Christian initiation, Eucharist, children and liturgy, liturgical sacramental theology, ecclesiology, and ecumenism have been published in liturgical, theological, and ecumenical journals. His forthcoming book explores the history and theology of the practice of infant communion in Roman Catholicism.

Degrees

  • Ph.D. in Liturgical Studies/ Sacramental Theology – The Catholic University of America
  • M. Phil. in Liturgical Studies/ Sacramental Theology – The Catholic University of America
  • M. Div. – University of Notre Dame
  • M.A. in Education – Stanford University
  • B.S. in Physics – Stanford University

Select Publications

Infant Communion in Roman Catholicism (Collegeville, MN: Liturgical Press Academic). [forthcoming, 2026]

“Eucharistic Prayers for Masses with Children, Another Look: Context, Text, Reception, and Evaluation.” Ecclesia Orans 40, no. 2 (2023): 279-305.

“Ecology and the Eucharist: Pope Francis’ Liturgical Theology of Caring for Our Common Home.” Studia Liturgica 53, no. 2 (2023): 279-305.

“Children and the Eucharist at the Council of Trent.” Theological Studies 83, no. 3 (2022): 379-399. https://doi.org/10.1177/00405639221113461.

“‘Urbi et Orbi’ and Digitally Mediated Liturgy: Embodied Participation and Ecclesial Formation.” Anaphora 15, nos. 1-2 (2021): 59-70.

A full list of Dr. O’Brien’s publications can be found here. https://fst-us.academia.edu/ChristopherOBrien

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Keith Warner, OFM
Associate Professor of Ethics and Spirituality – Academic Director of EdD in Catholic Social Thought in Practice
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Keith Warner, OFM
Associate Professor of Ethics and Spirituality – Academic Director of EdD in Catholic Social Thought in Practice

Biography

Name:Keith Douglass Warner, OFM
Specialization:Ethics & Spirituality
Email: keithwarner@fst.edu
Phone:619.574.5800

Keith Douglass Warner OFM is a practical social ethicist in the Franciscan tradition, researching the role of ethics and spirituality in the transformation of people and social structures. He teaches moral theology, Catholic social thought, and Franciscan philosophy. He has written, taught, and presented internationally on Franciscan eco-spirituality in the encyclical Laudato si’. With Ilia Delio OSF and Pamela Wood, is co-author of “Care for Creation: A Franciscan Spirituality of the Earth Expanded Edition” (Franciscan Media, 2024, translated into Spanish and Korean).

During his two decades at Santa Clara University, he designed and led a global action research fellowship in social entrepreneurship, and designed leadership formation programs for ACWECA, a network of 30,000 East African Catholic Sisters, to transform subsistence farms into social enterprises. He designed and led the Franciscan Journey Institute, a program of Franciscan philosophy as a way of life, structured by Bonaventure’s Itinerarium Mentis in Deum. He is a long-time member of the Commission on the Franciscan Intellectual-Spiritual Tradition, and is currently researching the globalization of the Franciscan charism since Vatican II. He is an affiliated scholar with Institute for Advanced Catholic Studies at USC.

Degrees

  • PhD in Environmental Studies from the University of California/Santa Cruz
  • MA in Spirituality from the Franciscan School of Theology

Step 1:

Create an online account to start an application and apply to FST graduate programs. Review the Steps to Apply page to see all requirements.

Step 2:

Connect with an FST enrollment advisor. An enrollment advisor can guide you through the process, coordinate a campus visit, and even get your application fee waived.

Step 3:

Gather additional application materials. Request official transcripts and the contact information for your letters of recommendation.

Step 4:

Submit your application. Once all application materials have been received, the Admissions Committee will review your application, and the Admissions team will contact you with the decision.

Tuition & Financial Aid

The Franciscan School of Theology utilizes the University of San Diego’s financial aid department to provide financial aid guidance and support to our student body.

FST offers scholarships based on financial need and academic merit. Additionally, we offer two special programs for employees of Catholic institutions and professed members of the Secular Franciscan Order (full-time, on-campus degree programs only).

FST also participates in the Federal Direct Loan Program, open to U.S. citizens and permanent residents.

We recommend that applicants begin the financial aid process when applying for admission.

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Hear from our
community of graduates

I am the university minister for liturgy at the University of San Diego where I also coordinate the university’s sacramental preparation programs. Franciscan School of Theology gave me the opportunity to connect my studies directly with my work in active ministry and provided me with the opportunity to grow both personally and professionally.

Nicolas Estrada Master of Theological Studies – Franciscan Theology, Class of 2025

I have been inspired and motivated by the deep love of God that inspires Franciscan spirituality and the caring, supportive environment that embraces all FST students. I will be applying my degree as I create and lead formation programs at my parish as the Adult Education Coordinator at St. James-by-the-Sea Episcopal Church in La Jolla.

Teresa Hixson Master of Theological Studies, Class of 2025

It all started with an inner need for faith seeking understanding, but I received much more than that. I got a whole community of support and new relationships between teachers, fellow students, and administrative staff. I got a profoundly important experience that will go with me not just to my next step but to every new step I take academically, professionally, and personally. Thank you, FST

Rosa Sanchez Master of Theological Studies, Class of 2022

Frequently Asked Questions

Why choose the Franciscan School of Theology? FST offers a Franciscan approach to theological education, integrating academic excellence with pastoral formation, community, and a hope-filled view of the world rooted in the teachings of St. Francis and St. Clare of Assisi. In partnership with the University of San Diego, we provide a rigorous, mission-driven education grounded in Catholic identity and a commitment to social transformation.
Does the Franciscan School of Theology admit lay persons? Our students come from all walks of life, both lay and religious. Our Requirements Page gives more information about requirements for our degrees and non-degree programs.
Do I have to be Catholic to attend FST? The Franciscan School of Theology gladly welcomes people of all beliefs to share in the Franciscan Spiritual and Intellectual Tradition – you do not need to be Roman Catholic to attend. FST is a Roman Catholic institution.
What do graduates do with their MTS degrees? The answer is — almost anything they want! The Master of Theological Studies – Franciscan Theology degree provides an academic foundation for those who want to teach at the elementary or secondary level; those who want to provide support in their parish; counselors who work in hospitals, private clinics, or social services; or anyone who wishes to deepen their connection to their faith, whether in their personal or professional lives. The MTS program is also excellent preparation for those who wish to pursue further advanced degrees or academic research. Please be aware of any additional degree or licensure requirements for your desired profession.
Does FST offer financial assistance? Yes. The Franciscan School of Theology offers financial aid in scholarships, tuition assistance, programs for employees of Catholic institutions, and a program for professed members of the Secular Franciscan Order. In addition, FST participates in the Federal Direct Loan Program, open to US citizens and permanent residents. Alumni can also audit courses as Clare of Assisi Scholars at a discounted rate.
Does the Franciscan School of Theology admit International Students? Yes. The Franciscan School of Theology has a long tradition of welcoming students from around the world. Students have joined us from countries such as Germany, Korea, Vietnam, Guam, Spain, China, the Philippines, Ireland, Japan, South Africa, and Mexico. FST is authorized under federal law to enroll non-immigrant students.

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